[server] prevent returning closed cursor to the database pool
In since c8c6ad8adbdb init_repository use repo.internal_cnx() instead of repo.system_source.get_connection() so it use the pool and we should not close cursors from the pool before returning it back. Otherwise we may have "connection already closed" error. This bug only trigger when connection-pool-size = 1. Since we are moving to use a dynamic pooler we need to get this fixed. This does not occur with sqlite since the connection wrapper instantiate new cursor everytime, but this occur with other databases.
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